Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45478g00001 ACTCATCCTGAAATATCAATTGAACAAGGTGAAGATTTAATTGATCATGAAGATTATGAAAATGTTGGTGGTGAAATCTCTGGAACCCAAGCTGCTACTGTCTATAGTAGTGTACCAAATGTTCAGGAGCTTGAGATGCTCTTAGGAGCATACTTTGTGCAAATTGGAGCCACATTGAACAAATTATCCGCGCTAGGTGAATATGTCGAGGACACAGAGGACTACATAAACATAACATTGGATGATAAACAGAACCGTATTCTACAAGCAGGAGTTCAGATAGGCACTGCAAGTGTGATTGTGAATTTCTTTGTTGTTGTGACAGGTATTTTTGGAATGAATATTCACATTGACATATTTGATGCTAAAGGGAATTCAGCATTCTTTGAGACAGTTTTTGGATGCACTGCTACTTGCATAATCTTATACTTCCTTGCCATGTTTTGGTACAAGAAAAGGCGCATACTGTAA 471 0.3779 THPEISIEQGEDLIDHEDYENVGGEISGTQAATVYSSVPNVQELEMLLGAYFVQIGATLNKLSALGEYVEDTEDYINITLDDKQNRILQAGVQIGTASVIVNFFVVVTGIFGMNIHIDIFDAKGNSAFFETVFGCTATCIILYFLAMFWYKKRRIL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45478g00001 156 Gene3D Magnesium transport protein CorA, transmembrane region 8 87 - -
Trme45478g00001 156 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 38 155 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45478g00001 Trme-Chr45478 81 631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45478g00001 28 156 MRS2 Gene Family AT3G19640 52.239 3.99e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45478g00001 - - lja:Lj0g3v0356029.1 184.496