Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45448g00001 GACACTCCATGGTTTTACTGCCAATACCCCATTAAACGAATATTCTTCTACCACTTCCCTCATCCAACTCATTACTTCCTTCAAACAACACTTCCTATTCTCAAACACTCTCTTTCCTTAACCCTCCAACACTTCTTCCCCTTCTCCTCCAACCTTGTTATCCCTTCAGATTCCCAAACTGCCCCTTACATACGTTACCTCAGCAGCACCAACGCTCTCTCTTTCACCGTAGCTGAATCCGCAGCAGACTTCAACCTCCTCATTTCTGATTCACAAGATGCTCAAAACTGGCACCCTCTTGTTCCAGATTTGTCTTCGTCAAGTACTGAACAGAACAGCACACGAGTCATTCCAATAATGGCCATACAAGTCACCGTTATGCCAAACTCTGGTTTATCTATCTGTCTCGCGTTCAAACATGTGGCTGCAGACGGAAAATCACTTCACCATTTCATGAAATTTTGGCCTCTGTTTCAAAAAACAGAGCAAACAACAAAAACAATTCGTCTTTTGAACACTCTCTCTGCCTCTTGA 534 0.4345 DTPWFYCQYPIKRIFFYHFPHPTHYFLQTTLPILKHSLSLTLQHFFPFSSNLVIPSDSQTAPYIRYLSSTNALSFTVAESAADFNLLISDSQDAQNWHPLVPDLSSSSTEQNSTRVIPIMAIQVTVMPNSGLSICLAFKHVAADGKSLHHFMKFWPLFQKTEQTTKTIRLLNTLSAS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45448g00001 177 PANTHER - 1 162 - -
Trme45448g00001 177 Gene3D - 1 173 IPR023213 -
Trme45448g00001 177 Pfam Transferase family 6 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45448g00001 Trme-Chr45448 1 534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45448g00001 14 155 Monolignol Biosynthesis Gene Families AT5G48930 25.517 1.14e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45448g00001 - - tpra:123894645 273.478