Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme453388g00001 AGAAAGACGCAGAATGCAGTTGCGTTTGCGAGAGCAACTGGTGATGGTGTTTTTAATGCGATTATATGGGATGTTGTTGTTGATCCTTCGTTTCAAGGGATTGGACTTGGGAAAGCTGTTGTTGAGAGGTTGATTGAGGATCTTGTTGGGAGAGGGATTTTGAATATTGCTCTTTATTCTGAGCCGAGAGTTATTGGGTTTTATCGACCTTTGGGTTTTGTTGCTGATCCTGATGGGATTAGAGGAATGGTTTACTCTAGAAAACCAAAAAGAAAATAG 279 0.4086 RKTQNAVAFARATGDGVFNAIIWDVVVDPSFQGIGLGKAVVERLIEDLVGRGILNIALYSEPRVIGFYRPLGFVADPDGIRGMVYSRKPKRK 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme453388g00001 92 Gene3D - 1 87 - -
Trme453388g00001 92 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 91 IPR000182 GO:0016747
Trme453388g00001 92 PANTHER ACYL-COA N-ACYLTRANSFERASE 5 90 IPR045039 GO:0008080
Trme453388g00001 92 Pfam Acetyltransferase (GNAT) family 6 73 IPR000182 GO:0016747
Trme453388g00001 92 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 5 76 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trme453388g00001 Acetyltransf_1 8.8e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme453388g00001 K22450 - zju:112493230 168.318