Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45285g00001 ATGAATCTTAGCAACGGTAAAGGATCCATTTCTACTGTTACTTCAACTGCTACTATGAAATCCGGTGAAGGTTCCGACCAGTTTCCGGCGGGTTTGCGAGTTCTTGTTGTTGATGATGATCCCACGTGCCTTATGATCCTTGAGAAGATGTTACGCACGTGTCTTTATGAAGGTATTCAATCGTGTTTCTCTCTAACTGAATTTGAAATCTTTCTCTTGAATTTCGCTCTTTTTCAAGTTTCAACGCTTAATTAG 255 0.4 MNLSNGKGSISTVTSTATMKSGEGSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEGIQSCFSLTEFEIFLLNFALFQVSTLN 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45285g00001 84 Gene3D - 11 73 - -
Trme45285g00001 84 MobiDBLite consensus disorder prediction 1 26 - -
Trme45285g00001 84 ProSiteProfiles Response regulatory domain profile. 33 84 IPR001789 GO:0000160
Trme45285g00001 84 MobiDBLite consensus disorder prediction 1 23 - -
Trme45285g00001 84 SUPERFAMILY CheY-like 31 65 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45285g00001 Trme-Chr45285 566 820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45285g00001 1 56 Response Regulator Gene Family AT4G16110 58.929 6.61e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45285g00001 - K14491 twl:120002911 102.064