Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme452305g00001 ATGGTTTTGTCTAAGTTGAAGGATGTTGCTGAAACTTATTTGAGTCATGAAGTGAACAATGCTGTTATCACTGTTCCTGCTTACTTCAACAACTCACAGAGACAAGCTACAAAAGATGCAGGGAAAATTGCCGGTTTTAATGTGATGAGGATCATCAATGAGCCTACTGCAGCTGCTATTGCTTATGGTTTCCACAAGAAAAAGTGGATACAAGGTGAGAAGAATGTGCTTGTGTTTGATTTTGGTGGTGGAACTTTTGATGTTTCCTTGGTGA 274 0.3942 MVLSKLKDVAETYLSHEVNNAVITVPAYFNNSQRQATKDAGKIAGFNVMRIINEPTAAAIAYGFHKKKWIQGEKNVLVFDFGGGTFDVSLV 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme452305g00001 91 SUPERFAMILY Actin-like ATPase domain 71 91 IPR043129 -
Trme452305g00001 91 Gene3D - 2 66 - -
Trme452305g00001 91 Gene3D - 67 91 - -
Trme452305g00001 91 FunFam Endoplasmic reticulum chaperone BiP 1 80 - -
Trme452305g00001 91 SUPERFAMILY Actin-like ATPase domain 1 66 IPR043129 -
Trme452305g00001 91 PRINTS 70kDa heat shock protein signature 84 91 - -
Trme452305g00001 91 PRINTS 70kDa heat shock protein signature 21 41 - -
Trme452305g00001 91 ProSitePatterns Heat shock hsp70 proteins family signature 2. 78 91 IPR018181 -
Trme452305g00001 91 Pfam Hsp70 protein 1 91 IPR013126 GO:0005524|GO:0140662
Trme452305g00001 91 PANTHER HEAT SHOCK PROTEIN 70KDA 1 91 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme452305g00001 Trme-Chr452305 1 274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme452305g00001 1 91 Calmodulin-binding Proteins AT5G02500 73.626 1.22e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme452305g00001 K03283 - gmx:121173324 144.436