Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme45211g00001 | TATAAACCAGCATCATGTGAAGTTCAGGCACACAAAGGTGATAAAGTGAAAGTACACTATCGGGGAAAACTCACCGATGGAACTGTTTTCGATTCCAGCTTTGAAAGAAATAGTCCAATTGATTTTGAGCTTGGTGGTGGTCAAGTGATCAAAGCTGCTGTGCTGGCTTTCTCAAGTACTGCAAAATGA | 189 | 0.4127 | YKPASCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERNSPIDFELGGGQVIKAAVLAFSSTAK | 62 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme45211g00001 | 62 | SUPERFAMILY | FKBP-like | 2 | 52 | - | - | |
| Trme45211g00001 | 62 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 7 | 53 | IPR001179 | GO:0003755 | |
| Trme45211g00001 | 62 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 13 | 62 | IPR001179 | GO:0003755 | |
| Trme45211g00001 | 62 | Gene3D | - | 2 | 61 | IPR046357 | GO:0003755 | |
| Trme45211g00001 | 62 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 2 | 51 | IPR044609 | GO:0000413|GO:0003755|GO:0061077 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme45211g00001 | 11 | 62 | Calmodulin-binding Proteins | AT3G25230 | 50.000 | 4.19e-11 | 54.3 |