Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45211g00001 TATAAACCAGCATCATGTGAAGTTCAGGCACACAAAGGTGATAAAGTGAAAGTACACTATCGGGGAAAACTCACCGATGGAACTGTTTTCGATTCCAGCTTTGAAAGAAATAGTCCAATTGATTTTGAGCTTGGTGGTGGTCAAGTGATCAAAGCTGCTGTGCTGGCTTTCTCAAGTACTGCAAAATGA 189 0.4127 YKPASCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERNSPIDFELGGGQVIKAAVLAFSSTAK 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45211g00001 62 SUPERFAMILY FKBP-like 2 52 - -
Trme45211g00001 62 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 7 53 IPR001179 GO:0003755
Trme45211g00001 62 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 13 62 IPR001179 GO:0003755
Trme45211g00001 62 Gene3D - 2 61 IPR046357 GO:0003755
Trme45211g00001 62 PANTHER PEPTIDYLPROLYL ISOMERASE 2 51 IPR044609 GO:0000413|GO:0003755|GO:0061077
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45211g00001 11 62 Calmodulin-binding Proteins AT3G25230 50.000 4.19e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45211g00001 K09569 - oeu:111393772 100.523