Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45197g00001 ACTGATGATGACAGTTATAGGCCTTCTAAAAGGGCCAGAGCTGATCACAGGTCTTCTGTACCGAGCGATGATGATCTTGATGGGATGAATAGTTCACCTGGAAGGTCACCAAGAAGACACTCAAGGGAGGATAATCCAACTACTGATCAAAATGATGATGATCAATATGAGGATGATTTTGATGATGAAGCTGGGTATGAGATGTACCGTGTTCAAGGAACTCTTAGAGAATGGGTTACAAGAGATGAAGTGCGCCGATTCATAGCCAGAAAGTTCAAAGATTTCTTACTCACTTATGTCAATCCAAAGAATGAACATGGAGACTTTGAATATGTGCGTCTGATAAATGAAATGGTGTCAGCTAACAAGTGCAGTTTGGAGATAGATTACAAGCAATTTATCTACGTCCATCCCAACATTGCCATTTGGCTGGCTGATGCACCTC 445 0.4157 TDDDSYRPSKRARADHRSSVPSDDDLDGMNSSPGRSPRRHSREDNPTTDQNDDDQYEDDFDDEAGYEMYRVQGTLREWVTRDEVRRFIARKFKDFLLTYVNPKNEHGDFEYVRLINEMVSANKCSLEIDYKQFIYVHPNIAIWLADAP 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45197g00001 148 Pfam MCM N-terminal domain 90 147 IPR027925 -
Trme45197g00001 148 MobiDBLite consensus disorder prediction 1 63 - -
Trme45197g00001 148 MobiDBLite consensus disorder prediction 1 23 - -
Trme45197g00001 148 Gene3D - 82 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45197g00001 Trme-Chr45197 1 620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45197g00001 2 148 Core DNA Replication Machinery Family AT1G44900 70.068 7.67e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45197g00001 K02540 - qsu:111999780 236.884