Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4514g00001 ATGGTTTCAAGGTCATATTCAAACTTGTTAGATCTTACTTCATGTGGCTCGCCGGCTTTCGGTCGCGAGAAGAAAAGGCTTCCTAGAGTTGCAACTGTTGCTGGAGTACTATCTGAATTAGATGATGAAACCAACAACAGTGTTGGCTCTGATGCTCCTTCCTCTATCTCTCAAGAGAGGATGATCATTGTTGGTAACCAGCTTCCATTAAAGGCACAAAGGAAAGAGGAGAATGGTAAGTGGGAATTCACTTGGGATGAGGACTCACTTCTTTTACAGCTGAAAGATGGTCTTGGTGATGATGTCGAAACAATCTATATCGGTTGTCTTAAAGAAGAAATCGATCCAATTGAGCAAGATGATGTTGCTCAGTACTTGCTTGACAATTTCAAATGTGTACCAACTTTCCTCCCTCCTGAACTTTTTACTAAATTCTATCATGGTTTCTGTAAACAGCATCTATGGCCTTTGTTTCATTACATGCTTCCACTGTCGCCTGATCTTGGTGGTCGGTTCGATAGATCCCTTTGGCAGGCTTATGTTTCTGTTAACAAGATATTTGCAGATAAAGTGATGGAAGTCATTAACCCTGATGAGGATTTTGTTTGGGTTCATGACTATCACTTGATGGTTCTTCCAACATTTTTGAGAAAGAGATTTAATAGGGCAAGGCTAGGATTCTTCCTCCATAGTCCTTTTCCTTCTTCCGAGATATACCGAACCCTTCCTGTTAGGGATGAACTTCTTAGAGCTCTTCTGAATTCCGACCTTATAGGATTTCATACTTTTGACTATGCTAGACATTTCCTCTCCTGCTGCAGTAGAATGCTAGGGATTGCTTATCAATCAAAGCGAGGCTATATCGGTCTTGAGTACTATGGAAGAACTGTTAGCATTAAGATTCTTCCAGTTGGTATTCATATAGGTCAGCTTGAATCAGTCATGAATCTTTCTGAGACAGAAAGCAAGGTTGCGGAGTTAAGAAACAGGTTCAAAGGTCAAACTGTGATGCTTGGGGTGGATGACATGGATATCTTCAAAGGAATCAGCTTAAAACTTTTGGCAATGGAACAATTGCTTTTACAACATGCTGATAAGAGGGGGAAAGTTGTTCTGGTTCAAATCGCAAACCCTGCTAGAGGCCGCGGAAAAGATGTGCAAGAAGTGCAGTGTGAAACTTATGCGACTGTGAAAAGGATAAATGACACATTTGGAAGGCCTGGATACACACCCGTAATCTTGATTGATACAACGCTCCAGAGTTACGAGCGAATCGCTTATTATACAATTGCAGAATGTTGTCTTGTTACAGCAGTGAGAGATGGGATGAACCTTATACCTTATGAGTATATCATTTGTAGACAAGGAAATGAGAAGATAGATGGGATTTTAGGAATAAACTCAAATAACCAAAAGAAGAGCATGCTGGTGGTGTCTGAGTTCATCGGTTGCTCTCCGTCATTAAGTGGCGCAATTCGGGTGAATCCATGGAATATTGATGCTGTTGCCGAAGCTATGGATTCTGCCTTAATGGTCGCGGAGTCTGAAAAACAAATGCGGCATGAGAAGCATTATAGGTACGTTAGTACGCACGATGTTGCCTATTGGGCTCGTAGCTTCTTGCAGGATCTGGAAAGGGCTTGTAGGGATCATCTGAGGAGGAGATGCTGGGGAATTGGTTTTGGTTTAGGATTTCGAGTAATCGCTTTGGATCCGAACTTTAGAAAGCTATCCGTGGAACATATTGTTTCAGCTTATAAGAGGACAAAGCACCGAGCTATTCTTTTGGATTATGACAGTACTATGGTCCAGCTTGGATCAATTAGTACAACACCTAATGCTGAAGCTGTTTCCATCTTGAATAGCCTGTGCAATGACACCAAGAATTGTGTTTTCATTGTAAGTGGAAAAGAGAGAAAGACTCTAACTGAATGGTTTTCTTCTTGCGAAAAGCTTGGACTTGCTGCAGAGCACGGCTATTTTGTGAGGACGATGAAATTTGGTTTGTTTGAGAGGTCATACTTTACGATAAAATAA 2037 0.4129 MVSRSYSNLLDLTSCGSPAFGREKKRLPRVATVAGVLSELDDETNNSVGSDAPSSISQERMIIVGNQLPLKAQRKEENGKWEFTWDEDSLLLQLKDGLGDDVETIYIGCLKEEIDPIEQDDVAQYLLDNFKCVPTFLPPELFTKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVINPDEDFVWVHDYHLMVLPTFLRKRFNRARLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGIAYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLESVMNLSETESKVAELRNRFKGQTVMLGVDDMDIFKGISLKLLAMEQLLLQHADKRGKVVLVQIANPARGRGKDVQEVQCETYATVKRINDTFGRPGYTPVILIDTTLQSYERIAYYTIAECCLVTAVRDGMNLIPYEYIICRQGNEKIDGILGINSNNQKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALMVAESEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKHRAILLDYDSTMVQLGSISTTPNAEAVSILNSLCNDTKNCVFIVSGKERKTLTEWFSSCEKLGLAAEHGYFVRTMKFGLFERSYFTIK 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4514g00001 678 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Trme4514g00001 678 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Trme4514g00001 678 SUPERFAMILY HAD-like 592 664 IPR036412 -
Trme4514g00001 678 Gene3D - 591 672 IPR023214 -
Trme4514g00001 678 FunFam Alpha,alpha-trehalose-phosphate synthase 314 529 - -
Trme4514g00001 678 Gene3D Glycogen Phosphorylase B; 314 529 - -
Trme4514g00001 678 Pfam Trehalose-phosphatase 595 664 IPR003337 GO:0003824|GO:0005992
Trme4514g00001 678 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 549 - -
Trme4514g00001 678 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Trme4514g00001 678 Gene3D Glycogen Phosphorylase B; 53 313 - -
Trme4514g00001 678 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 47 664 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme4514g00001 Trme-Chr4514 41 2209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4514g00001 1 663 Trehalose Biosynthesis Gene Families AT4G17770 80.271 0.0 1142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4514g00001 K16055 - gmx:100782799 1229.54