Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45076g00001 ATGCAATTTGATGCAGAGTATGCAAGGTGGCTGGAAGAGCAGAATCGACAAATTAATGAACTGAGAGCAGCTGTAAATTCTCATGCAAGTGATACCGAACTTCGCATGATTGTTGATGGTATATTGGCACATTATGATGATATTTTTAGGCTGAAAGGTGTTGCAGCTAAGGCTGATGTTTTCCATTTGTTGTCTGGCATGTGGAAAACGCCTGCTGAGAGGTGTTTTCTATGGCTCGGTGGTTTTCGGTCGTCTGAACTTCTCAAGGTGAGCTTATGCTGA 282 0.4291 MQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDDIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKVSLC 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45076g00001 93 ProSiteProfiles DOG1 domain profile. 1 93 IPR025422 GO:0006351|GO:0043565
Trme45076g00001 93 Pfam Seed dormancy control 17 90 IPR025422 GO:0006351|GO:0043565
Trme45076g00001 93 Coils Coil 11 31 - -
Trme45076g00001 93 PANTHER TRANSCRIPTION FACTOR TGA9 2 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45076g00001 Trme-Chr45076 572 853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45076g00001 3 90 bZIP Transcription Factor Family AT3G12250 78.409 2.59e-51 162