Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45038g00001 GCTCTTAAAAAAGCAGATATTGGAATAGCTGTTGATGATGCAACTGATGCTGCTCGTAGTGCATCCGACATTGTTCTAACCGAACCAGGTCTCAGTGTTATCATTAGTGCCGTGCTAACGAGTCGAGCAATATTCCAGAGAATGAAGAATTACACAATCTACGCAGTTTCGATAACAATCCGTATTGTGCTTGGTTTCATGTTACTGGCTCTCATATGGCAATTTGATTTTCCACCATTCATGGTGCTGATTATTGCTATTCTTAATGATG 271 0.4022 ALKKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILND 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45038g00001 90 SUPERFAMILY HAD-like 1 85 IPR036412 -
Trme45038g00001 90 Gene3D - 10 90 - -
Trme45038g00001 90 PANTHER CALCIUM-TRANSPORTING ATPASE 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45038g00001 Trme-Chr45038 516 1000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45038g00001 1 90 Primary Pumps ATPases AT3G47950 98.889 8.67e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45038g00001 K01535 - egr:104419339 166.777