Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme450279g00001 ATGGATGTTCTCAAAGATAGGTGCCTCATTTCTGTATCAGAAGGAAGAATTGTGATGCATGATCTAATACAAGAAATGGGACATGAAATTGTTCGTCAACAATGTGTCAGTGATCCTGGAAAACGTAGTCGACTATGGAAGCATGAGGAAATTTATCAAGTTTTGAAAAAGAACAAG 177 0.3672 MDVLKDRCLISVSEGRIVMHDLIQEMGHEIVRQQCVSDPGKRSRLWKHEEIYQVLKKNK 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme450279g00001 59 SUPERFAMILY "Winged helix" DNA-binding domain 2 56 IPR036390 -
Trme450279g00001 59 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 55 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme450279g00001 Trme-Chr450279 30 206 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme450279g00001 4 55 WRKY Transcription Factor Family AT4G12020 43.396 7.19e-08 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme450279g00001 - - mtr:11410139 101.679