Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme45013g00001 ATGTTGTTAGAAGCATACTTTGTTGTCATTGACAGCACTCTAAACAAGTTGACATCTTTAAAAGAATACATCGATGACACGGAAGATTTCATCAACATTCAACTGGATAATGTGCGGAATCAGCTTATCCAGTTTGAGCTTTTGCTCACAACTGCAACATTTGTGGTTGCAATATTTGGAGTGGTGGCAGGAGTATTTGGGATGAACTTTGAAATTCCATTCTTTGATGTCCCATCTGCATTCCA 245 0.3837 MLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNFEIPFFDVPSAF 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme45013g00001 81 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 48 81 IPR045863 -
Trme45013g00001 81 Gene3D Magnesium transport protein CorA, transmembrane region 49 81 - -
Trme45013g00001 81 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 81 IPR039204 -
Trme45013g00001 81 Gene3D Magnesium transport protein CorA, transmembrane region 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme45013g00001 Trme-Chr45013 429 965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme45013g00001 1 81 MRS2 Gene Family AT1G16010 93.827 3.63e-47 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme45013g00001 K16075 - gmx:100801387 138.658