LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme44936g00001	AGCCTCAAAAGTATTCCACCTCTCAAGTTAGCTTCTTTAGAAAAACTTGATCTTTCAAATTGTGATAATCTCGAGAGTTTTTCGCCTGTGGTGGATGGGTTTATGGATAAACTTAAATTCTTGAGTGTTATGTATTGTCGCAAGCTCAGGAGCATTCCACCTCTCAAATTGGCTTTCCTAGAACAACTCGATCTTTCATATTGTGATAGTCTTGAGAATTTTCCACTTGTGGTGGATGGATTGCTAGAGAAACTTAGAATCTTKMGACTTATAAGTTGTAACCGTATCCAGAGTATCCCTCCTCTCAAGTTTGCTTCCCTGGAAGAACTTAATCTTTCATATTGTGATAATCTCGAGAGTTTTCCACACGTGATAGATGGGTTGCTGGGTAAACTTAAGTTCTTTAATGTTAGAGATTGCTACAAGCTCAAAAGTATTCCACCTCTCAAATTGGATTTGCTGGAACAACTCGTTTTTTCATATTGTAACAGTCTAGAGAGTTTTCCACCCATCGTGAATGGGCAGCTGGGGAAACTTAAAATCTTGAGAGTTACAAATTGTAGCAATATCAAGAGTATCCCGCCTCTCAAGTTGGCTTCGCTAGAAGAACTCAATCTTTCATATTGTGATAATCTTGARAGTTTTCCAGATTTYGWRGATGGGTTTCCAAGTAATCTCAAAGTGCTCAGTGTTAGATATTGCCGCAAGCTCAAAAGTATTCCACCTCTCAAGTTTGCTTTGCTAGAAGTTCTCGATCTTTCATATTGTGATAGTCTTGAGAGTTTTCCAAAAATATTAAGCAAGATGGAAAATATACGAGAGTTACCAAGTAGCATTGTCATGATGCAAGAACTGGCTGAGCTTATCATTGAGGACGGTGGGTGGCTATTCCCAAAAGAAGA	902	0.3825	SLKSIPPLKLASLEKLDLSNCDNLESFSPVVDGFMDKLKFLSVMYCRKLRSIPPLKLAFLEQLDLSYCDSLENFPLVVDGLLEKLRIXRLISCNRIQSIPPLKFASLEELNLSYCDNLESFPHVIDGLLGKLKFFNVRDCYKLKSIPPLKLDLLEQLVFSYCNSLESFPPIVNGQLGKLKILRVTNCSNIKSIPPLKLASLEELNLSYCDNLESFPDFXDGFPSNLKVLSVRYCRKLKSIPPLKFALLEVLDLSYCDSLESFPKILSKMENIRELPSSIVMMQELAELIIEDGGWLFPKE	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme44936g00001	300	Gene3D	Ribonuclease Inhibitor	196	292	IPR032675	-
	Trme44936g00001	300	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57	82	215	-	-
	Trme44936g00001	300	Pfam	Leucine Rich Repeat	12	24	IPR001611	GO:0005515
	Trme44936g00001	300	Gene3D	Ribonuclease Inhibitor	1	81	IPR032675	-
	Trme44936g00001	300	Gene3D	Ribonuclease Inhibitor	82	195	IPR032675	-
	Trme44936g00001	300	SUPERFAMILY	L domain-like	2	271	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme44936g00001	Trme-Chr44936	1	1001	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme44936g00001	178	292	WRKY Transcription Factor Family	AT4G12020	35.374	1.90e-09	57.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme44936g00001	-		-	mtr:11443802	474.552