Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme44847g00001 TTTGGCTTCATGTTCATTGCATTGATCTGGAAATTTGACTTCTCTCCTTTCATGGTCTTGATTATTGCCATTCTTAATGATGGAACAATCATGACAATTTCCAAAGATAGGGTGGTGCCATCTCCATTACCTGATAGCTGGAAACTAAAGGAGATATTTGCTACTGGGATTGTTCTTGGAGGGTATTTAGCCCTGATGACTGTAATCTTCTTCTGGGCAATGAAAGAAAACGACTTCTTCCCTGACAAATTTGGAGTTAGACACTTGAATCACGATGAAATGATGTCTGCTTTGTATCTACAAGTCAGTATTGTTAGCCAGGCTCTCATATTTGTGACTCGTTCCCGTGGTTGGTCGTTTCTTGAACGCCCCGGAGCTCTATTAGTTATTGCTTTCTTGATTGCTCAACTGATTGCTACATTAATAGCAGTATATGCTAACTGGGGATTTGCAAAGGTACAAGGAATTGGTTGGGGTTGGGCAGGAGTAATTTGGCTATACAGTGTCGTCTTCTATGTTCCCCTTGACGTGATGAAGTTTGCCATCCGCTACATATTGAGTGGCAAGGCTTGGTTGAATATGCTAGAAAACAAG 594 0.4125 FGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVVPSPLPDSWKLKEIFATGIVLGGYLALMTVIFFWAMKENDFFPDKFGVRHLNHDEMMSALYLQVSIVSQALIFVTRSRGWSFLERPGALLVIAFLIAQLIATLIAVYANWGFAKVQGIGWGWAGVIWLYSVVFYVPLDVMKFAIRYILSGKAWLNMLENK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme44847g00001 198 Gene3D - 1 185 - -
Trme44847g00001 198 PANTHER CALCIUM-TRANSPORTING ATPASE 2 197 - -
Trme44847g00001 198 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 186 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme44847g00001 Trme-Chr44847 105 981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme44847g00001 1 198 Primary Pumps ATPases AT4G30190 82.000 7.27e-111 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme44847g00001 K01535 - gmx:100816905 376.711