Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme448369g00001 GACCAAAAATTCTGCTATGAAACTCTTGGTTCTGTCCGTGGCGCCGACGCTGCAGATCCTAAGGCATACTTAGCGGCTGCTTTGAAAGCAGCCACTGACAATGTCATTAAGGCATTTAACATGAGTGATAGACTCAGTGTTGAGTACGGCGACAAGGATAGGGGCATCAAGATGGCTCTTGATGGCTGCAAAGAGATGATGGAGTTTGCTTTGGACAGTCTTGATCTCTCCACCACTGT 239 0.477 DQKFCYETLGSVRGADAADPKAYLAAALKAATDNVIKAFNMSDRLSVEYGDKDRGIKMALDGCKEMMEFALDSLDLSTTV 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme448369g00001 80 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 79 IPR035513 -
Trme448369g00001 80 Pfam Plant invertase/pectin methylesterase inhibitor 2 76 IPR006501 GO:0004857
Trme448369g00001 80 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 77 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme448369g00001 Trme-Chr448369 55 293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme448369g00001 5 79 Carbohydrate Esterase AT3G10710 32.000 2.87e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme448369g00001 - K01051 gmx:100781507 87.8113