Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme44692g00001 ATGAAGCTCCACTACCTTAACTCACTATTTCTTCTTGTGATCATCTTGGATCTAAGTACCAATATCTATGGTCTCTCATCACAACTTGTGCCCAAAAAAATATTGAAGCCATTATTACCACCTCCTGAAGCCTTGCTTTCAATTGGTCACTATCATGGAACATGTCCAGATGCTGAAGGCATTATCTCACAAAAAGTTGCTGCTTGGATTAAGAAGGATCCTACCTTGGCCCCATCCATCATCCGTTTGCATTTCCATGATTGTGCCATCAGAGTAATCACATAA 285 0.4035 MKLHYLNSLFLLVIILDLSTNIYGLSSQLVPKKILKPLLPPPEALLSIGHYHGTCPDAEGIISQKVAAWIKKDPTLAPSIIRLHFHDCAIRVIT 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme44692g00001 94 PRINTS Plant peroxidase signature 55 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme44692g00001 94 PRINTS Plant peroxidase signature 79 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme44692g00001 94 ProSitePatterns Peroxidases active site signature. 77 88 IPR019794 GO:0004601
Trme44692g00001 94 Gene3D - 46 94 - -
Trme44692g00001 94 ProSiteProfiles Plant heme peroxidase family profile. 45 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme44692g00001 94 PANTHER PEROXIDASE 25-RELATED 16 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme44692g00001 94 SUPERFAMILY Heme-dependent peroxidases 36 90 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme44692g00001 Trme-Chr44692 600 884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme44692g00001 39 90 Peroxidase AT1G30870 46.154 5.48e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme44692g00001 K00430 - gmx:100792775 132.88