Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme44584g00001 ATGGCTAAAGGTTTAGGCCTAGGATGCACGTACGGTATAGCTTGCATGTCGTGGGCGCTAGTTTTTTGGTATGCCGGAGTTTTTATCAGAAATGGACAAACCGATGGAGGCAAAGCATTCACAGCTATTTTCTCTGCCATTGTCGGTGGAATGAGTTTGGGTCAGTCGTTTTCGAACTTAGGTGCATTTAGCAAAGGCAAAGCAGCCGGATACAAATTGATGGAAATCATCAAGCAGAAACCAACCATAGTCGAAGATCTGTTAGACGGAAAGTGCTTAGCCGAGGTTAATGGCAACATTGAATTTAAAGATGTTAGTTTCAGCTATCCGTCAAGACCGGATGTGATGATTTTTCGGAATTTCTCAATCTTTTTTCCTGCCGGCAAAACTGTTGCGGTTGTTGGTGGTAGTGGTTCTGGAAAAAGTACCGTTGTTTCCTTGATCGAAAGGTTCTATGATCCTAATGACGGTCAGGTTCTGCTCGATAATGTGGACATTAAGACACTACAACTAAAATGGTTACGCGATCAAATTGGTTTGGTGAATCAAGAGCCTGCACTATTTGCAACTACAATTCGTGAGAACATACTGTATGGAAAACCTGATGCAACAAATGATGAAATCGAAGCCGCAACTTCTGCTGCAAATGCTCATAGCTTTATTACATTGCTTCCGAATGGCTACAACACTCAG 693 0.4242 MAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVEDLLDGKCLAEVNGNIEFKDVSFSYPSRPDVMIFRNFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNDGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTIRENILYGKPDATNDEIEAATSAANAHSFITLLPNGYNTQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme44584g00001 231 Gene3D ABC transporter type 1, transmembrane domain 1 79 IPR036640 GO:0005524|GO:0016020
Trme44584g00001 231 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 65 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trme44584g00001 231 SUPERFAMILY ABC transporter transmembrane region 6 85 IPR036640 GO:0005524|GO:0016020
Trme44584g00001 231 PANTHER ABC TRANSPORTER B FAMILY 2 231 IPR039421 -
Trme44584g00001 231 Pfam ABC transporter 119 216 IPR003439 GO:0005524
Trme44584g00001 231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 230 IPR027417 -
Trme44584g00001 231 Gene3D - 89 231 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme44584g00001 Trme-Chr44584 11 926 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme44584g00001 1 231 Calmodulin-binding Proteins AT2G36910 58.442 2.49e-83 268