Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme445266g00001 GATGCTGATTTGAATGCTAGATTGGGAGATTTTGGACTTTCAAGATTATATGATCATGGTGCTGATCCGCATACAACTCATGTAGCTGGAACTGTAGGTTATCTTGCTCCTGAGCATACCAGAACAGGTAAGGCTACTAAATTTTCTGATGTGTATGCTTTTGGTGCATTTCTTCTTGAGGTTGTTTGCGGTAGGAGGCCTATAGATCGTGTAGGAAAATATGAGAATGCTATTCTAGTTGATTGTGTGTTTCAATGTTGGGAAAGAGGTGAGATTCTTGAGGCAAAGGATGC 293 0.4061 DADLNARLGDFGLSRLYDHGADPHTTHVAGTVGYLAPEHTRTGKATKFSDVYAFGAFLLEVVCGRRPIDRVGKYENAILVDCVFQCWERGEILEAKDA 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme445266g00001 98 ProSiteProfiles Protein kinase domain profile. 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme445266g00001 98 SUPERFAMILY Protein kinase-like (PK-like) 1 86 IPR011009 -
Trme445266g00001 98 PANTHER - 1 93 - -
Trme445266g00001 98 Pfam Protein kinase domain 4 71 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme445266g00001 98 Gene3D Transferase(Phosphotransferase) domain 1 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme445266g00001 Trme-Chr445266 1 293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme445266g00001 1 97 Receptor kinase-like Gene Family AT2G37710 68.367 1.94e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trme445266g00001 Pkinase 2.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme445266g00001 - - gmx:100783815 159.073