Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme444960g00001 AATGGAAAAGTTTATTTGGAGGCTACTACTATGCATTTAAATGATTATGGAGAAGCAGGTTTGCGAACACTGGCTCTGGCCTATAGAAGGCTTGAAGAAAAAGAGTACTCGGATTGGAATGATGAGTTTCAGAAAGCCAAAGCAGCTGTTGGAGCTGATAGAGATGCAATGCTTGAGCGGGTATCAGAGATGATGGAAAAAGAGTTGATTCTTGTTGGGGCTACTGCTATAGAAGACAAA 240 0.4125 NGKVYLEATTMHLNDYGEAGLRTLALAYRRLEEKEYSDWNDEFQKAKAAVGADRDAMLERVSEMMEKELILVGATAIEDK 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme444960g00001 80 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 80 - -
Trme444960g00001 80 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 12 79 IPR023299 GO:0000166
Trme444960g00001 80 Gene3D - 3 79 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme444960g00001 Trme-Chr444960 55 294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme444960g00001 1 80 Primary Pumps ATPases AT3G13900 78.750 1.68e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme444960g00001 K01530 - gmx:100819559 140.969