Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme44485g00001 ATGACTATCCAAAAAATTGAAGAGTTCATTTTCAAATCTAAGCTTCCTGATATCTACATTCCAAAACACCTTCCTCTTCATTCATATTGCTTTGAGAATCTATCTGAGTATGGATCCCGTCCATGCCTCATTGATGCTCCAACCGGCGAAATCTACACCTACTATGATGTCGAACTCGCTTCACGAAGAGTCGCCTCCGGTCTCAACAAATTAGGCATCGGACAAGGCGATGTCATCATGGTTCTTCTCCCTAATTGTCCGGAATTCGTGTTTTCTTTTCTCGGCGCTTCTTTCCGCGGCGCTGTAATGACCGCCGCAAATCCTTTCTTCACCTCAGCTGAAATTGCTAAGCAAGCAAAAGCCTCCAATGCTAAGTTGCTTGTAACACAAGGTTGTTATTATGACAAAGTTAAGGATTTGGAAAATGTGAAGCTGGTTTTTGTGGACTCTTCACCAGAAGGAGAAAATCATATGCATTTCCGTGAGCTGGCTCAAGCTGATGAGAATGAAATTGAAGAG 519 0.4277 MTIQKIEEFIFKSKLPDIYIPKHLPLHSYCFENLSEYGSRPCLIDAPTGEIYTYYDVELASRRVASGLNKLGIGQGDVIMVLLPNCPEFVFSFLGASFRGAVMTAANPFFTSAEIAKQAKASNAKLLVTQGCYYDKVKDLENVKLVFVDSSPEGENHMHFRELAQADENEIEE 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme44485g00001 173 Gene3D - 4 173 IPR042099 -
Trme44485g00001 173 SUPERFAMILY Acetyl-CoA synthetase-like 10 152 - -
Trme44485g00001 173 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 166 - -
Trme44485g00001 173 Pfam AMP-binding enzyme 33 144 IPR000873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme44485g00001 8 172 Monolignol Biosynthesis Gene Families AT3G21240 58.683 1.48e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme44485g00001 K01904 - qsa:O6P43_017902 256.144