Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme444290g00001 ATGTGTAGTTACGGTGGAAAGATCCAACCACGCAGCCACGACAACCAGCTTTCTTATATCGGCGGCGACACCAAAATACTAGCCGTCGATCGCAACATCAAGTTTCAAGCCTTTCTATCGAAGCTATCCACTCTCTGCGACGCAATTCAACAAGATGTAACGTTCAAGTACCAGCTTCCCGG 182 0.4835 MCSYGGKIQPRSHDNQLSYIGGDTKILAVDRNIKFQAFLSKLSTLCDAIQQDVTFKYQLPG 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme444290g00001 61 Pfam PB1 domain 13 58 IPR000270 GO:0005515
Trme444290g00001 61 PANTHER OS05G0427100 PROTEIN-RELATED 1 61 - -
Trme444290g00001 61 SUPERFAMILY CAD & PB1 domains 13 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme444290g00001 Trme-Chr444290 1 182 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme444290g00001 1 61 MAP Kinase Kinase Kinase AT2G35050 40.984 1.49e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme444290g00001 - - psat:127106335 122.094