Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme44375g00001 ATGGCACCAAGTTTTGACTGTGTTAATAGCCTTCTTTGCACCGAGGAAGATAGCAGTGTTTTTGATGATGCTGAATATGGTGGCGGTGTTAATTCGATGGAGGAGGTGTACGAGGATTCGTGGCATCCTAGGTTCGACAATCAGAGGAACCAACAACAACGATTTGTTGTTCCTGATGAGTTGCCATTGCAGAGTGAAGAGTGTTTGGTTCTGATGTTGGAAAAAGAATTTCAACAATGGCCTGGTGCTGATTACTTGAATAGGTTGCAATTTGGGGTTTTGGATGTTGCAGCAAGAGAGGAAGCCATCAATTGGATTCAGAAGGTTCAAGCACATTTCGGTTTCGGTCCTCTATGTGGTTATCTATCGATTAATTATATGGACCGTTTCCTTGTTGCATATGAATTACCG 411 0.4258 MAPSFDCVNSLLCTEEDSSVFDDAEYGGGVNSMEEVYEDSWHPRFDNQRNQQQRFVVPDELPLQSEECLVLMLEKEFQQWPGADYLNRLQFGVLDVAAREEAINWIQKVQAHFGFGPLCGYLSINYMDRFLVAYELP 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme44375g00001 137 SUPERFAMILY Cyclin-like 63 134 IPR036915 -
Trme44375g00001 137 Gene3D - 82 133 - -
Trme44375g00001 137 Pfam Cyclin, N-terminal domain 71 134 IPR006671 -
Trme44375g00001 137 Gene3D - 72 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme44375g00001 Trme-Chr44375 389 914 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme44375g00001 72 137 Core Cell Cycle Gene Families AT2G22490 54.545 2.75e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme44375g00001 K18810 - gmx:100803873 161.384