Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme44356g00001 ATGCAGATTGCAGTGAAACGATTGAAAGTTTGGAGCAACAAAGCAGATAGGGAATTTGCGGTTGAACTCGAGATATTGGGAAGAGTACAACACAAGAATCTTATTGGTTTACGCGGCTATTGTGCCGAAGGACAAGAACGATTAATTGTGTATGATTATATGCCAAATTTTAACCTGTTCGCCCATCTTCATGGACCACAATCAGCAGAATGCCTTCTTGATTGGAATCGCCGGATGAATATTGCCATTGGATTTGCCGAGGGAGTTGTATACCTTCACCACCAAGCAACACCGCGTATCATCCACAGGGACATCAAGCCAAGTAGTGTGTTGCTAGATTCAAATTTTGAAGCCCTAATTGGTGGTTTCGGGTTTGCTAGGTTGATCCCTGATGGCGAAACACAAGTGACTACAAATGTTAAGGGTACCTTAGGCTACCTTGCACCAGAATATGCTATGTTGGGTAAAGCAAGTGAAAGTTGTGATGTTTACAGTTTTGGTATTCTCCTTCTAGAACTAGCTAGTGGGAGAAAACCAATTGTAAAG 546 0.4231 MQIAVKRLKVWSNKADREFAVELEILGRVQHKNLIGLRGYCAEGQERLIVYDYMPNFNLFAHLHGPQSAECLLDWNRRMNIAIGFAEGVVYLHHQATPRIIHRDIKPSSVLLDSNFEALIGGFGFARLIPDGETQVTTNVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGRKPIVK 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme44356g00001 182 FunFam Os07g0541700 protein 54 143 - -
Trme44356g00001 182 Pfam Protein kinase domain 2 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme44356g00001 182 Gene3D Transferase(Phosphotransferase) domain 1 55 182 - -
Trme44356g00001 182 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 179 - -
Trme44356g00001 182 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Trme44356g00001 182 SUPERFAMILY Protein kinase-like (PK-like) 2 180 IPR011009 -
Trme44356g00001 182 ProSiteProfiles Protein kinase domain profile. 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme44356g00001 Trme-Chr44356 13 929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme44356g00001 3 180 Trihelix Transcription Factor Family AT1G26150 51.685 2.95e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Trme44356g00001 Pkinase 1.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme44356g00001 - - rcu:8282354 308.145