Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme44291g00001 GGAACTATTACATCTGCCTTTAACTATGGAGTCATTAGTTGGTGCAACAAGATATTGGGGCCTGCTTTAGTTGCCCTCTACAATCCACTTCAACCTGGTTTTTCTGCCCTTCTGTCTCAGATATTTCTTGGAAGTCCAATTTACCTTGGAAGTATCATAGGGGGATCTTTGATCATGGCTGGTCTTTATACCGTTACCTGGGCATCTCATAAAGAAAGACAAGCAACTGTTGGAATTACTTCTGATGGCTCTTTGGTCTCTGAACCACTTATTATTCATGACAAAAGTGCACACCAAAGTGCGCATATATTTCCGGGGTCCTCTAACGCATCTCAAACCTGA 342 0.424 GTITSAFNYGVISWCNKILGPALVALYNPLQPGFSALLSQIFLGSPIYLGSIIGGSLIMAGLYTVTWASHKERQATVGITSDGSLVSEPLIIHDKSAHQSAHIFPGSSNASQT 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme44291g00001 113 PANTHER WAT1-RELATED PROTEIN 2 80 IPR030184 GO:0016020|GO:0022857
Trme44291g00001 113 SUPERFAMILY Multidrug resistance efflux transporter EmrE 2 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme44291g00001 Trme-Chr44291 206 743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme44291g00001 1 98 Nodulin-like Gene Family AT5G45370 56.863 3.02e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme44291g00001 - - vvo:131646703 155.992