Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme44243g00001 GATCTGTGCAAGAGCATCAACCCCGATGAGGCCGTTGCTTATGGTGCAGCTGTCCAGGCTGCTCTGTTGAGTGAAGGCATTAAGAATTTTCCAAACTTGGTGCTGCGAGATGTTACACCCTTGTCACTTGGTATTTCAGTAGATGGTGGTACTATGAATGTGGTAATTCCTAGGAACACTTCTGTACCTGTGGCGAAGACAAAAGGATACAATACTGCTAATGATAATTGTGATGTGGACATTTTGGTTTATGAGGGTGAGAGAGCAAGAGTTAGTGACAATAATATGCTTGGTTCTTTTATTCTTTCTTGCCGTCCTGGTGCTCCTCGTGGCACGCTCTTGGAGGTATGCTTCGCTATCGATGAAAATAATATCCTAACTGTTTCTGCGATGGAAAAGTCCACTGGCAATATGAACGAGATCACAATAACCAACGACAAAGAAAGGTTATCCAGAGAAGAAATTAAAAAATTGATTGAAGAAGCCAGAGAGTATCATGCTGAAGATGAGAGATTCCTACAGAAGGCTAAGGTAATGAATGAATTAGATGACTGCATTTACAAGTTAAGGAATGCTCTAAAGAATAAAAAAGTTAAATCAAAGCTATCATCTCATAAAGTTAAAAAGATCAATCTTGCAATTTCTAAGGCTACAAATTTGCTTGATAAGAACAAGCACCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNGGAAGACCTTGAAGTCAAGTCTGGCTAG 759 0.3715 DLCKSINPDEAVAYGAAVQAALLSEGIKNFPNLVLRDVTPLSLGISVDGGTMNVVIPRNTSVPVAKTKGYNTANDNCDVDILVYEGERARVSDNNMLGSFILSCRPGAPRGTLLEVCFAIDENNILTVSAMEKSTGNMNEITITNDKERLSREEIKKLIEEAREYHAEDERFLQKAKVMNELDDCIYKLRNALKNKKVKSKLSSHKVKKINLAISKATNLLDKNKHXXXXXXXXXXXXXXXXXXEDLEVKSG 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme44243g00001 252 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 21 204 IPR029047 -
Trme44243g00001 252 PANTHER HEAT SHOCK PROTEIN 70KDA 2 202 IPR013126 GO:0005524|GO:0140662
Trme44243g00001 252 Coils Coil 245 250 - -
Trme44243g00001 252 PRINTS 70kDa heat shock protein signature 32 51 - -
Trme44243g00001 252 PRINTS 70kDa heat shock protein signature 6 26 - -
Trme44243g00001 252 PRINTS 70kDa heat shock protein signature 111 127 - -
Trme44243g00001 252 Pfam Hsp70 protein 2 224 IPR013126 GO:0005524|GO:0140662
Trme44243g00001 252 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 30 183 IPR029047 -
Trme44243g00001 252 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 179 226 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme44243g00001 Trme-Chr44243 1 759 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme44243g00001 1 225 Calmodulin-binding Proteins AT3G12580 55.702 5.71e-74 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme44243g00001 K03283 - gmx:102667572 265.774