Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme44161g00001 ATGTTAAGCACTGAAATTATTGCGGAGTGCTTTGCGTTTCTTGTTTGTACAAAGTGGTCCAATCCTGTCATTCATAGAAGTTCCAGAGAACCNNNNNNTTCTTCTACTACAATTAGATATCTTGACTGGAACAGTGGTTTACTGGTTTCTTCAGAAGAAGATCAACGTCAGGCGAGAATCTGTAGCCTGCAAGACATAGGGGGTCATTTCATGGAAGTACCCATTATTGTCTTCCAGGGAACGCCTGCTTTTGCTGCACAGTTACCTCTTGCAATTCTTTTTTCTCCCGTTTTCGTACTGCAAGGTGTTGGTGTGATATTATCTGCATCTAAATTTGTGGAGAAACTTGTGCTTCTTCTACGAAGTGGAGCTGGCGGAGGACTTTACTTTAGATTCTCTTCCAGAGCTCATGATTGCTTGGGTTTTTTGAACCATGGTTCTAG 443 0.4153 MLSTEIIAECFAFLVCTKWSNPVIHRSSREPXXSSTTIRYLDWNSGLLVSSEEDQRQARICSLQDIGGHFMEVPIIVFQGTPAFAAQLPLAILFSPVFVLQGVGVILSASKFVEKLVLLLRSGAGGGLYFRFSSRAHDCLGFLNHGS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme44161g00001 147 Pfam Transmembrane Fragile-X-F protein 6 100 IPR019396 -
Trme44161g00001 147 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 7 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme44161g00001 Trme-Chr44161 100 730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme44161g00001 7 147 C3H Transcription Factor Family AT1G18470 66.225 4.47e-66 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme44161g00001 - - tpra:123921257 253.062