Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme441220g00001 GGTCTAGCTAAACTAGCACCTGAAGGCAGAGCTTATTACCTGTCTACTCGAGTGATGGGCACATTTGGGTATGTAGCACCTGAGTATGCTATGACTGGACACCTACTCGTTAAAAGCGATGTTTATAGCTACGGGGTTGTCTTGCTTGAACTGTTGACCGGAAGGAAACCTGTGGATATGTCACAGCCAACTGGACAGGAGAACCTTGTG 210 0.4762 GLAKLAPEGRAYYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLV 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme441220g00001 70 SUPERFAMILY Protein kinase-like (PK-like) 1 63 IPR011009 -
Trme441220g00001 70 Gene3D Transferase(Phosphotransferase) domain 1 1 70 - -
Trme441220g00001 70 ProSiteProfiles Protein kinase domain profile. 1 70 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme441220g00001 70 Pfam Protein kinase domain 1 63 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme441220g00001 70 PANTHER OS01G0750732 PROTEIN 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme441220g00001 Trme-Chr441220 3 295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme441220g00001 1 70 Receptor kinase-like Gene Family AT4G02010 92.857 2.98e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trme441220g00001 Pkinase 1.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme441220g00001 - - oeu:111405731 137.502