Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme44107g00001 ATGGCATCAAGGGTAGGGTCGAATATCCCTCGTGCAAACTCAACCGTTGATGAGCTTATCAAACTTTTCGGCTCAAAAGGCTTAACCACACAGGACATGGTTGCACTTTCTGGGGCCCATACAATTGGGTTTGCTCATTGCAAGAACTTTGTGAGTCGCCTCTACAATTACCGGGGAAAGGGTCAACCGGATCCAGATATGAACCCTAAACTATTGCAAGCTCTTAGAATGTACTGTCCAAATTTTGGTGGAAACTCAGATATTGTTGCACCATTTGATGCCACTACTCCTTTCATATTTGACCATGCATATTACGGTAACTTGCAGAGCAAGATGGGTTTGTTGGCATCCGACCAGGCTTTGGCTTTGGACCCGCGAACYAAGTCACTGGTTCAAGATTTTGCAAAGGATAAGCAGAAGTTTTTTCAAKCTTTTGTAGCTGCTATAGACAAAATGAGTTTAGTGAAAGTTGTGAGAGGGAAAATGCATGGGGAGAAAAGAAGAGATTGTAGCATGCATATGTGA 525 0.4305 MASRVGSNIPRANSTVDELIKLFGSKGLTTQDMVALSGAHTIGFAHCKNFVSRLYNYRGKGQPDPDMNPKLLQALRMYCPNFGGNSDIVAPFDATTPFIFDHAYYGNLQSKMGLLASDQALALDPRTKSLVQDFAKDKQKFFQXFVAAIDKMSLVKVVRGKMHGEKRRDCSMHM 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme44107g00001 174 PRINTS Plant peroxidase signature 147 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme44107g00001 174 PRINTS Plant peroxidase signature 91 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme44107g00001 174 PRINTS Plant peroxidase signature 31 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme44107g00001 174 PRINTS Plant peroxidase signature 107 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme44107g00001 174 ProSitePatterns Peroxidases proximal heme-ligand signature. 32 42 IPR019793 -
Trme44107g00001 174 Pfam Peroxidase 3 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme44107g00001 174 ProSiteProfiles Plant heme peroxidase family profile. 1 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme44107g00001 174 PRINTS Haem peroxidase superfamily signature 32 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme44107g00001 174 PRINTS Haem peroxidase superfamily signature 93 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme44107g00001 174 Gene3D Peroxidase, domain 2 10 152 - -
Trme44107g00001 174 FunFam Peroxidase 10 152 - -
Trme44107g00001 174 PANTHER - 2 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme44107g00001 174 SUPERFAMILY Heme-dependent peroxidases 6 172 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme44107g00001 2 174 Peroxidase AT2G34060 58.960 6.03e-73 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme44107g00001 K00430 - gmx:100777463 298.13