Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme44028g00001 ATGGTTGAGCAGGAAATGGAGGAACGTCCGGATTTAGTCTCAATTGGATCTTGTGTTTTACTCGTGCTTCTTCACGGGAATGATTTGTGTACACTCAATCTAGGGGACAGTAGAGCAGTGCTTGCGACATGCAGTACAAGTAACGGAATAAACGGGAATGAGAGATTGAAAGCTATTCAGCTAACTGATAGTCATACTGTTGACAATGAAGATGAAAGAACTCAACTTCTTGCTAGTCATCCTGATGATCCTAAGACCATTGTATCAGGGAGAGTGAAAGGAAAATTGAAGGTTACGCGCGCTTTTGGAGTTGGCTACTTGAAAAAGATTAGAAGTTATGCTTGTTTGGATAATACGAATAGGGAGATGAAAATGATACTAGTAGTATTAGCCT 394 0.4036 MVEQEMEERPDLVSIGSCVLLVLLHGNDLCTLNLGDSRAVLATCSTSNGINGNERLKAIQLTDSHTVDNEDERTQLLASHPDDPKTIVSGRVKGKLKVTRAFGVGYLKKIRSYACLDNTNREMKMILVVLA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme44028g00001 131 PANTHER PROTEIN PHOSPHATASE 2C 5 111 IPR015655 GO:0004722|GO:0006470
Trme44028g00001 131 ProSiteProfiles PPM-type phosphatase domain profile. 1 131 IPR001932 -
Trme44028g00001 131 Pfam Protein phosphatase 2C 13 109 IPR001932 -
Trme44028g00001 131 Gene3D - 1 125 IPR036457 -
Trme44028g00001 131 SUPERFAMILY PP2C-like 6 109 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme44028g00001 Trme-Chr44028 364 900 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme44028g00001 1 109 PP2C-type Phosphatase Gene Family AT3G16560 68.807 1.54e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme44028g00001 - - tpra:123885607 216.083