Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43996g00001 CGCACATTGGTTTCTGTGGTAGGCATGGGTGGACTCGGAAAAACAACTCTTGCTAAGCATGCTTTTGGTAACCAACTTGTGAAAAATCACTTTGATTGTCGCTTTTACATCTCAGCTTCTCAATCCAACATTGAGAATGAGTTGTTGATTGGTATGATAAAGAAGTTTTGCGAGGATAGCAATGAGCCTGTTCCACAGAATCTGAAGGATATGGATGATATTGCATTGATTGAGTATGTGAGACAATACCTTGAGCCAAAGCGGTACTTGGTGTGGTTTGATGATGTTCGGAAAGTAAATTTTTCTGATGAGATTGCATATGCCATGGCTGATAATAACAGAGGAAGTAGAATCATTGTGACCACAAGAAATAAGGATGCCGCAGATAATTTTAAGGCACATTTTTCTGTTCATATTCACGACCTAAAGCCTTTGCCTAAAGAGAAAGCATTGGAACTATTTTGCAAGAAGGCATTTAGTGGGAAGTGTCCAAAAGATCTTGAAAAAAAGTCTGAAGCAATTGTTGAAAAATGTGGAGGGCTACCACTAGCAATTGTGATCGTTGGTGGTATTTTGTCAACAAAATCTAAAACCTTATTGGAGTGGGAAGCGGTGAGTAAAGATCTGGGCATGGAGTTAGATGGCAATGTGCGTATCACTAAGCTAACAACAATTTTATCTTGGAGTTATGATGATCTTCCATGGCGTTTGAAATCATGCATGTTGTATTTTGGTATCTATCCGGAGAACTACACCATCAACTGTAAGAGACTTACTAGGCAATGGATAGCTGAAGGATTTGTTATGTCTGATCGGCGAAGAACTTTGGAGGAAGTTGCTGAAGAGTACTTGAAAGAGCTGATACAGACAAGTTTGGTTCAAGTTTCTAGTGTTGGCATTGATGGGAAAGTTAAAAGCT 919 0.3928 RTLVSVVGMGGLGKTTLAKHAFGNQLVKNHFDCRFYISASQSNIENELLIGMIKKFCEDSNEPVPQNLKDMDDIALIEYVRQYLEPKRYLVWFDDVRKVNFSDEIAYAMADNNRGSRIIVTTRNKDAADNFKAHFSVHIHDLKPLPKEKALELFCKKAFSGKCPKDLEKKSEAIVEKCGGLPLAIVIVGGILSTKSKTLLEWEAVSKDLGMELDGNVRITKLTTILSWSYDDLPWRLKSCMLYFGIYPENYTINCKRLTRQWIAEGFVMSDRRRTLEEVAEEYLKELIQTSLVQVSSVGIDGKVKS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43996g00001 306 Gene3D - 144 229 IPR042197 -
Trme43996g00001 306 Gene3D - 230 305 IPR036388 -
Trme43996g00001 306 FunFam Probable disease resistance protein At1g63360 230 306 - -
Trme43996g00001 306 PRINTS Disease resistance protein signature 178 192 - -
Trme43996g00001 306 PRINTS Disease resistance protein signature 3 18 - -
Trme43996g00001 306 PRINTS Disease resistance protein signature 83 97 - -
Trme43996g00001 306 PANTHER DISEASE RESISTANCE PROTEIN RP 4 294 IPR044974 GO:0006952
Trme43996g00001 306 Gene3D - 1 137 IPR027417 -
Trme43996g00001 306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 244 IPR027417 -
Trme43996g00001 306 Pfam NB-ARC domain 3 232 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43996g00001 Trme-Chr43996 3 921 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43996g00001 4 197 WRKY Transcription Factor Family AT5G45050 25.641 2.46e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43996g00001 K13457 - vum:124847779 370.163