Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43941g00001 ATGAAAATGCAGATTGAGATTCAAGACCTTGAAGGTTCTAGGAGATATTCTGATGGCGATGATCTAGAAGGTGACTTAAGCAATGGAGATGACTTAAAACTATTTAGCTATTCAACAATAATTGTTGCTACCAATGGCTTTTCATCAGAAAACAAGTTAGGACAGGGTGGCTTTGGACCTGTTTTTAAGGATGGATATCCGTGGTGTCCCGAGTTCAAACCCAAGATCTCTCATTTGTGTGAGTTTCATGTG 252 0.3929 MKMQIEIQDLEGSRRYSDGDDLEGDLSNGDDLKLFSYSTIIVATNGFSSENKLGQGGFGPVFKDGYPWCPEFKPKISHLCEFHV 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43941g00001 84 SUPERFAMILY Protein kinase-like (PK-like) 32 63 IPR011009 -
Trme43941g00001 84 Gene3D Phosphorylase Kinase; domain 1 19 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43941g00001 Trme-Chr43941 66 407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43941g00001 29 67 Trihelix Transcription Factor Family AT1G26150 56.410 1.26e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43941g00001 - - lja:Lj3g3v0392830.2 85.5001