Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43934g00001 ATGTTACCCGGGCGCACAGATAATGCTATCAAGAACCATTGGAACACTGCTATACGCACCCAAACCCGCAAGTACAAAAGGAACGGATGGAATAGTTCGAAAAATTCAGTACTTCAGAAATACATTAATGAAATCACTTCTACTAAGGAAGTTGAGAAAGATCATGATGAAGAATTGGCTACTCAAGAGGATGAACAACCTGGTGGCAATGTGGAAATGATTTTCAATAATGGTGATGATGGAATGGAGTTTCTTGTTGAGGTTCCCATGAAGGAGGAAATGGATTTCATGGAGATGATATGTAAAAACCCTTAA 315 0.3905 MLPGRTDNAIKNHWNTAIRTQTRKYKRNGWNSSKNSVLQKYINEITSTKEVEKDHDEELATQEDEQPGGNVEMIFNNGDDGMEFLVEVPMKEEMDFMEMICKNP 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43934g00001 104 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 22 IPR017930 -
Trme43934g00001 104 MobiDBLite consensus disorder prediction 50 70 - -
Trme43934g00001 104 Gene3D - 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43934g00001 Trme-Chr43934 97 411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43934g00001 1 103 MYB Transcription Factor Family AT5G58850 34.746 7.98e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43934g00001 K09422 - tpra:123892067 128.642