Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43930g00001 ATGGTTGCAACTTTATTGTCAGCTGGGGCAAAGCCAAATTTGGTCACAGATCCAACTCACCAAAACCCCGGTGGATGTACTGCCGCTGATCTTGCTTATACAAGGGGTTATCATGGCTTAGCAGCTTATCTTTCGGAAAAGTCTTTAGTTGAGCAATTCAATGACATGAGCTTAGCGGGAAATATCAGTGGCTCACTGGAAACTAACACGGATGATCCAGTAAATTCCGAGAACCTTACCGAGGAACAGCTCTACCTTAAAGATACATTGGCAGCTTACCGTACAGCTGCTGATGCAGCAGCACGCATACAAGAAGCGTATAGGCAGCATTCCTTAAAGTTACAAACTGAGGCGGTTGAGTTTTCCAGTCCGGAAGCTGAAGCACGCAAAATAGTTGCAGCAATGAAGATTCAGCATGCCTTCCGCAATTTTGAAACAAAGAAAGTGATGGCTGCTGCTGCTCGCATACAA 471 0.4544 MVATLLSAGAKPNLVTDPTHQNPGGCTAADLAYTRGYHGLAAYLSEKSLVEQFNDMSLAGNISGSLETNTDDPVNSENLTEEQLYLKDTLAAYRTAADAAARIQEAYRQHSLKLQTEAVEFSSPEAEARKIVAAMKIQHAFRNFETKKVMAAAARIQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43930g00001 157 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43930g00001 Trme-Chr43930 1 471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43930g00001 1 157 CAMTA Transcription Factor Family AT3G16940 58.228 3.53e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43930g00001 K21596 - gmx:100793970 238.81