Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme439286g00001 ATGAAGATTGTTGCGAGTTGTCTTATAGATGCTAACCTGGACAAGAGTAGAGTTGATGATGTTGTCCTTGTTGGCGGGTGTTCTAGGATTCCTAAAGTGCAGCAGCTGTTACAAGACTTTTTCAATGGGAAGCAATTGTGCAAGAGCATTAACCCTGATGAGGCTGTAGC 170 0.4353 MKIVASCLIDANLDKSRVDDVVLVGGCSRIPKVQQLLQDFFNGKQLCKSINPDEAVA 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme439286g00001 57 Gene3D - 1 47 - -
Trme439286g00001 57 ProSitePatterns Heat shock hsp70 proteins family signature 3. 21 35 IPR018181 -
Trme439286g00001 57 Gene3D - 48 57 - -
Trme439286g00001 57 PANTHER HEAT SHOCK PROTEIN 70KDA 1 57 IPR013126 GO:0005524|GO:0140662
Trme439286g00001 57 PRINTS 70kDa heat shock protein signature 50 57 - -
Trme439286g00001 57 PRINTS 70kDa heat shock protein signature 18 34 - -
Trme439286g00001 57 SUPERFAMILY Actin-like ATPase domain 2 57 IPR043129 -
Trme439286g00001 57 Pfam Hsp70 protein 2 57 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme439286g00001 Trme-Chr439286 1 170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme439286g00001 1 57 Calmodulin-binding Proteins AT5G02500 78.947 2.10e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme439286g00001 K03283 - twl:119992986 95.1301