Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme439190g00001 ATGGGAATATCTGGTACAGCTCTTGCAAATGAGACAAGTAACGCAATTCTCATGTCTAATGACATCCGAAAAGTCCCCGAAGCAATTCGTTTAGCAAGAAAAACAACTCGAAAGCTCATAGAAAATGTCATTATTTCGGTTGGATTCAAATGCGCCATACTTGCATTGGCAATTGCCGGATATCCATTGGTTTGGCTCGCTGTTTTGACCGATGTTGGAACTTGTTTACTTGTGATTCTC 240 0.4083 MGISGTALANETSNAILMSNDIRKVPEAIRLARKTTRKLIENVIISVGFKCAILALAIAGYPLVWLAVLTDVGTCLLVIL 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme439190g00001 80 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 1 80 - -
Trme439190g00001 80 Gene3D - 1 50 IPR023214 -
Trme439190g00001 80 SUPERFAMILY HAD-like 1 80 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme439190g00001 Trme-Chr439190 1 240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme439190g00001 1 80 Primary Pumps ATPases AT4G30110 68.750 2.91e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme439190g00001 K01534 - gmx:100815324 144.436