Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43833g00001 TTGCAGGAGTTTAATTCCAAACTATCTGATTTTGGCTTGGCTAAGGCGGGTCCTACCGGTGATAGAACTCACGTGTCTACTCAAGTTATGGGCACTCAAGGATATGCAGCACCTGAATATGTTGCAACTGGTCGGCTAACGGCCAAAAGTGATGTATACAGCTTTGGAGTTGTTATGCTTGAACTTTTATCCGGAAGACGTGCTGTTGATAAAACAATAGCTGGTGTTGACCAGAATCTAGTAGACTGGGCAAAACCATATTTAGGCGATAAACGGAGACTATTCCGAATCATGGATTCCAAATTAGAAGGCCAATATCCACAAAAAGGAGCATTCATGGCTGCTACACTTGCACTACAATGCCTTAACAGAGAAGCGAAGGCAAGGCCTGCAATGATAGATGTTTTAGCAACTCTTGAACAGATAGAAGCACCTAAACAGGCACCTCGGATTTCCTTATCAGAACATCAGAGACTCCACGCTCCTGTGAGAAGGTCTCCTGCTCGAAACCGGACGCCTTCAAATGTTACTCCTACTGCATCGCCACTGCCATCTGTTCGGCAATCTCCTCGTGCGCGCTA 581 0.4578 MQEFNSKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVMLELLSGRRAVDKTIAGVDQNLVDWAKPYLGDKRRLFRIMDSKLEGQYPQKGAFMAATLALQCLNREAKARPAMIDVLATLEQIEAPKQAPRISLSEHQRLHAPVRRSPARNRTPSNVTPTASPLPSVRQSPRAR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43833g00001 193 MobiDBLite consensus disorder prediction 168 193 - -
Trme43833g00001 193 SUPERFAMILY Protein kinase-like (PK-like) 4 160 IPR011009 -
Trme43833g00001 193 PANTHER OS01G0588500 PROTEIN-RELATED 2 143 - -
Trme43833g00001 193 MobiDBLite consensus disorder prediction 147 193 - -
Trme43833g00001 193 Pfam Protein kinase domain 6 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme43833g00001 193 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme43833g00001 193 Gene3D Transferase(Phosphotransferase) domain 1 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43833g00001 Trme-Chr43833 2 1012 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43833g00001 3 139 Glycoside Hydrolase AT3G07070 56.204 2.64e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trme43833g00001 Pkinase 4.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43833g00001 - - gmx:100809778 327.02