Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43767g00001 ATGGAGGTTAGTTGGTTTGATGAGCCTGAAAACTCGAGCGGAGCAATTGGTGCAAGGCTCTCAGCAGATGCTGCTTCTGTTCGCGCCCTTGTTGGTGATGCACTTGGACTGGTGGTTCAGAATTTGGCAACTGCATTGGCTGGTTTGATTATTGCTTTCGTTGCGAGCTGGCAGCTCGCGTTGATTATTCTTGTCTTGATTCCTCTCATTGGATTAAATGGATACGTTCAAATGAAATTCATGAAGGGATTCAGTGCAGATGCAAAGATGATGTACGAGGAGGCTAGCCAAGTTGCAAACGATGCTGTTGGAAGCATAAGAACTGTGGCATCTTTCTGTGCTGAAGATAAGGTTATGGAACTATATAGGAAGAAATGTGAAGGTCCCATGAAAACGGGGATAAGGCAAGGAATAATCAGTGGATCGGGATTCGGTGTTTCATTTTTCTTATTGTTTTGTGTCTATGCAACAA 472 0.4386 MEVSWFDEPENSSGAIGARLSADAASVRALVGDALGLVVQNLATALAGLIIAFVASWQLALIILVLIPLIGLNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYRKKCEGPMKTGIRQGIISGSGFGVSFFLLFCVYAT 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43767g00001 157 Gene3D ABC transporter type 1, transmembrane domain 1 157 IPR036640 GO:0005524|GO:0016020
Trme43767g00001 157 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 2 157 IPR039421 -
Trme43767g00001 157 Pfam ABC transporter transmembrane region 1 156 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trme43767g00001 157 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 157 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trme43767g00001 157 SUPERFAMILY ABC transporter transmembrane region 2 156 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43767g00001 Trme-Chr43767 8 744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43767g00001 2 156 Calmodulin-binding Proteins AT2G36910 40.000 2.11e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43767g00001 K05658 - gmx:100777909 276.559