Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43763g00001 ATGGGTAAGACCTTGCTTGCTCAACACATATATAATGATTCGAAGATGACGGATGAATTTGATGTCAAAACTTGGGTCTGTATTTCAGACGAATTTGATGTTTTCAAGATAACGAGAGCTATTCTTGAAGGTATCAATGGATCAATTGATGATAGTAGAGATCTAAATATGGTTCAAGAAAGGTTGAAAGAAAAATTGACAGGAAAACGATTTCTTCTTGTTTTGGATGATATTTGGAATGAAAAACGTGATCAATGGGAAGCTTTGCAGACTCCTTTTAATTACGGAGCTCGAGGAAGCAAAATTATCGTCACTACACGGAATTTGAAAGTTGCCTTAACCACTCGGTCAACTAGAATTCATCATCTGGAGGAATTACAAGAAGAACATTGTTTGCAATTGTTTTCAAGACATGCATTCCAAGATGAAAATCCTCAATCGAATCCCGAGTTGATGGAAATTGGTAAAAAGATAATTGGAAAATGTAAAGGATTGCCTCTATCCTTGAAAACAATTGGAAGTCTCTTGTACACAAAATCGTCTTTGGTGGAATGGAAAATTATTTTGTCAAGTGAGATATGGGACTTACCTGAAGAGGTTAGCAATATTGTCCCCGCTTTAAGACTCAGCTATGACCACCTTCCTTCTCATTTGAAGAGATGTTTTGCTTCTTGTTCTCTATTCCCAAAAGATTATGTGTTTGAAAAGGAACAATTAATTTTAATATGGATGGCTGAAAATTTTCTACAATGTCCTCAACCTCAACAGAGTAAGAGTATGTTAGAAGTTGGCGAACAATACTTTGATGATCTGTTATCGAGGTTGGAAGTTGATGAAGCACAAAATGTATCAAAAGTTACTCGTCATTTTTCGTTCTTGAGATATAG 887 0.3551 MGKTLLAQHIYNDSKMTDEFDVKTWVCISDEFDVFKITRAILEGINGSIDDSRDLNMVQERLKEKLTGKRFLLVLDDIWNEKRDQWEALQTPFNYGARGSKIIVTTRNLKVALTTRSTRIHHLEELQEEHCLQLFSRHAFQDENPQSNPELMEIGKKIIGKCKGLPLSLKTIGSLLYTKSSLVEWKIILSSEIWDLPEEVSNIVPALRLSYDHLPSHLKRCFASCSLFPKDYVFEKEQLILIWMAENFLQCPQPQQSKSMLEVGEQYFDDLLSRLEVDEAQNVSKVTRHFSFLRY 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43763g00001 295 Gene3D - 1 123 IPR027417 -
Trme43763g00001 295 PRINTS Disease resistance protein signature 65 79 - -
Trme43763g00001 295 PRINTS Disease resistance protein signature 162 176 - -
Trme43763g00001 295 PANTHER DISEASE RESISTANCE PROTEIN RP 1 274 IPR044974 GO:0006952
Trme43763g00001 295 Pfam NB-ARC domain 1 212 IPR002182 GO:0043531
Trme43763g00001 295 Gene3D - 125 215 IPR042197 -
Trme43763g00001 295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 225 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43763g00001 Trme-Chr43763 1 986 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43763g00001 1 235 WRKY Transcription Factor Family AT5G45050 27.459 1.34e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43763g00001 - - gmx:100777280 388.267