Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme437447g00001 ATGCTTCGGACAACTTGTGGGACTCCTAATTATGTAGCTCCTGAGGTACTCAGTCACAAGGGTTATAAAGGTGCTCCGGCGGATGTTTGGTCCTGTGGCGTTATCCTCTATGTTCTAATTGCTGGATATCTTCCCTTTGATGAGCTTGATCTAAC 155 0.4581 MLRTTCGTPNYVAPEVLSHKGYKGAPADVWSCGVILYVLIAGYLPFDELDLT 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme437447g00001 52 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 1 48 - -
Trme437447g00001 52 Gene3D Transferase(Phosphotransferase) domain 1 1 52 - -
Trme437447g00001 52 Pfam Protein kinase domain 3 47 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme437447g00001 52 ProSiteProfiles Protein kinase domain profile. 1 52 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme437447g00001 52 SUPERFAMILY Protein kinase-like (PK-like) 3 50 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme437447g00001 Trme-Chr437447 1 267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme437447g00001 1 51 CBL-interacting serine-threonine protein kinases AT4G24400 86.275 8.24e-30 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trme437447g00001 Pkinase 1.9e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme437447g00001 - - egr:104448049 110.538