Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43706g00001 GCTGTTAAGCTTCTAGATTTGGATGGTTCTCAAGGTCATAAAGAATGGCTGACTGAGGTTGTGTTTCTTGGTCAATTGAGACATCAACACCTTGTGAAGCTGATTGGATATTGTTGTGAAGAGGAACATAGGCTTTTGGTTTATGAGTATTTACCAAGAGGAAGCTTAGAACATCAACTATTTAGAAGATATTCAGCATCATTACCATGGTCAACAAGAATGAAAATTGCTGTTGGAGCTGCAAAAGGTCTAGCCTTTTTACATGATGCAAAGAAACCAGTTATCTATAGAGATTTCAAAGCTTCAAACATCTTATTAGACTCTGATTATAATGCAAAACTCTCTGATTTTGGCTTGGCAAAAGATGGTCCAGAAGGAGATGATACACATGTTTCAACTAGAGTTATGGGCACTCAAGGTTATGCTGCCCCGGAATACATCATGACAG 448 0.3817 AVKLLDLDGSQGHKEWLTEVVFLGQLRHQHLVKLIGYCCEEEHRLLVYEYLPRGSLEHQLFRRYSASLPWSTRMKIAVGAAKGLAFLHDAKKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMT 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43706g00001 149 PANTHER OS01G0588500 PROTEIN-RELATED 1 149 - -
Trme43706g00001 149 SUPERFAMILY Protein kinase-like (PK-like) 1 148 IPR011009 -
Trme43706g00001 149 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme43706g00001 149 ProSitePatterns Serine/Threonine protein kinases active-site signature. 94 106 IPR008271 GO:0004672|GO:0006468
Trme43706g00001 149 FunFam Os07g0541700 protein 51 138 - -
Trme43706g00001 149 Gene3D Phosphorylase Kinase; domain 1 1 51 - -
Trme43706g00001 149 Pfam Protein kinase domain 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme43706g00001 149 Gene3D Transferase(Phosphotransferase) domain 1 52 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43706g00001 Trme-Chr43706 3 988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43706g00001 1 149 Glycoside Hydrolase AT3G07070 61.842 2.10e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trme43706g00001 Pkinase 9.9e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43706g00001 - - gmx:100305397 298.13