Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43674g00001 GAAGAAAATCGGCTGTTACAATCCGAAGAATGTGAGACAATACCATTATCCACGCCGCTGTCCACTCTATCAACAACGTTAGACGATGGAAACAGAGAGGACTACGTTTACGCGGCTAAGGACAAGGTTCGTATTTTCGACTTGGAGTCAAACGGAAATAGTACCGGATCAACGGTGGTTCCTCCATTTTCATGGAAGAAGCTCTGGCTCTTTACTGGGCCAGGGCTTCTAATGAGCGTGGCTTTTTTGGATCCAGGAAATTTGGAAGGAGACTTACAAGCCGGTGCGATTGCAGGGTATTCGTTGCTTTGGCTTTTAATGTGGTCCACCATCATGGGACTCTTCATACAACTTCTATCGGCGAGGCTTGGTGTCGCCACGGGGCGCCACCTTGCCGAGCTTTGTAGGGAGGAGTATTCCAATTGGGCTAGATTAGTTTTGTGGTTCCTTGCTGAGTTGGCTTTGATTGCAGCTGATATTCAAGAGGTTATTGGTAGTGCTATTGCTCTTAAGATTCTTAGCCATGGGGTTCTTCCCATTTGGGCAGGTGTTGTAATCACTGCCTTTGATTGTTTCTTCTTTCTATTTTTGGAGAATTATGGAGTAAGGAAGTTAGAAGGTGTTTTCGCTATTTTCATTGGAACTATGGGCTTTTCTTTTGCATGGATGTTCTTTGATACAAAGCCAAGTGAAGAAGAACTTCTTATGG 709 0.4471 EENRLLQSEECETIPLSTPLSTLSTTLDDGNREDYVYAAKDKVRIFDLESNGNSTGSTVVPPFSWKKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLMWSTIMGLFIQLLSARLGVATGRHLAELCREEYSNWARLVLWFLAELALIAADIQEVIGSAIALKILSHGVLPIWAGVVITAFDCFFFLFLENYGVRKLEGVFAIFIGTMGFSFAWMFFDTKPSEEELLM 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43674g00001 236 NCBIfam Nramp family divalent metal transporter 73 227 - -
Trme43674g00001 236 PRINTS Natural resistance-associated macrophage protein signature 177 196 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme43674g00001 236 PRINTS Natural resistance-associated macrophage protein signature 147 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme43674g00001 236 PRINTS Natural resistance-associated macrophage protein signature 202 223 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme43674g00001 236 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 60 235 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme43674g00001 236 Pfam Natural resistance-associated macrophage protein 89 234 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43674g00001 Trme-Chr43674 14 1013 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43674g00001 31 236 Inorganic Solute Cotransporters AT1G47240 72.330 4.24e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43674g00001 K21398 - gmx:100803732 388.267