Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43652g00001 ATGTTTGCTGTGGTCAGAGAGACAATCCCAGAGGCACAGGACAATGGAAAAGGTGCCAAGTGGAGTGGTGCAGCTGAGATGACAGAAGAACAAGCGTTAGCGGAGCAGCAAAGGATGTTTGCAGAGGCACGTGCTAGAATGAATGGAGGGACCATTTCTTCCAATCAACCCGATGCTGACCAAAGTTTAGAAAACTAA 198 0.4798 MFAVVRETIPEAQDNGKGAKWSGAAEMTEEQALAEQQRMFAEARARMNGGTISSNQPDADQSLEN 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43652g00001 65 PANTHER PROTEIN DR1 HOMOLOG 11 64 IPR044255 -
Trme43652g00001 65 MobiDBLite consensus disorder prediction 1 22 - -
Trme43652g00001 65 Coils Coil 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43652g00001 Trme-Chr43652 648 968 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43652g00001 13 58 CCAAT-DR1 Transcription Factor Family AT5G23090 65.217 1.69e-14 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43652g00001 K21751 - qsa:O6P43_022982 88.9669