Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4364g00001 TTAACAGTGCTGACAATGTATGCCTTTCTTTATGGAAAAACGTATTTGGCACTCTCTGGTGTTGGTGAAACAATTGAAGAAAGGGCAAAGATAACCACAAACATTGCTCTGAGTGCTGCTTTGAGTACACAGTTTCTCTTCCAAATTGGTATCTTCACTTCTGTGCCAATGGTCTTGGGCTTCATTCTTGAACAAGGCTTCTTGAGGGCAGTTGTCAATTTTGTCACAATGCAGTTTCAGCTCTGCACTGTTTTTTTAGCTTTTTCTTTGGGTACAAGAACCCATTATTTTGGAAGGACAATTCTTCATGGTGTTGCAAGGTATCAAGCGACTGGCCGGGGGTTTCTCGTCTGCCATATCAAATTTTCCGAAAATTACAGACTCTACTCTCGTAGTCATTTTGTTAAAGGGTTCGAAGTTGTGATTCTATTGATAGTATCTCTTGCTTATGGCTACAATGAATGTGGTGCAACGTCATACATTCTTTTGAGTATAAGCAGTTGGTTTATGGCTCTATCCTGGTTGTTTGCTCCATATTTATTCAACCCGTATGGATTTGAGTGGCAAAAGTAA 573 0.3979 LTVLTMYAFLYGKTYLALSGVGETIEERAKITTNIALSAALSTQFLFQIGIFTSVPMVLGFILEQGFLRAVVNFVTMQFQLCTVFLAFSLGTRTHYFGRTILHGVARYQATGRGFLVCHIKFSENYRLYSRSHFVKGFEVVILLIVSLAYGYNECGATSYILLSISSWFMALSWLFAPYLFNPYGFEWQK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4364g00001 190 Pfam 1,3-beta-glucan synthase component 3 190 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Trme4364g00001 190 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme4364g00001 Trme-Chr4364 121 2074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4364g00001 1 190 Cell Wall Biosynthesis AT3G07160 78.947 7.43e-101 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4364g00001 K11000 - gmx:100787540 336.65