Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43613g00001 ATGTTTTCACTTGATAATCTCATACCATCAATTTTTTTATATGAATTTCTTGTTCAACTAAGATCACCATCAGCAGTGATATACAAGAGCCATGAAGAAAAAGTTCCAGCTCCATTTGCTGCTACATTCTCATCTAGAGGACCAAATCCAGGATCCAAAAATGTCCTCAAGCCTGACATTGCAGCTCCTGGAATTGATATCTTGGCATCTTATACTCTTAGGAAATCACTCACCGGTTTGGATGGAGATACGCAATTTTCAGAATTTTCTCTAATATCTGGAACTTCGATGGCATGTCCTCATGTTGCTGGCGTAGYGGCATATGTGAAATCATTCCATCCCAATTGGACTCCTGCTGCAATCAGATCTGCAATTATCACCACTG 385 0.3974 MFSLDNLIPSIFLYEFLVQLRSPSAVIYKSHEEKVPAPFAATFSSRGPNPGSKNVLKPDIAAPGIDILASYTLRKSLTGLDGDTQFSEFSLISGTSMACPHVAGVXAYVKSFHPNWTPAAIRSAIITT 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43613g00001 128 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 128 IPR045051 -
Trme43613g00001 128 ProSiteProfiles Serine proteases, subtilase domain profile. 1 128 - -
Trme43613g00001 128 Pfam Subtilase family 40 128 IPR000209 GO:0006508|GO:0008236
Trme43613g00001 128 Gene3D - 16 33 - -
Trme43613g00001 128 ProSitePatterns Serine proteases, subtilase family, serine active site. 94 104 IPR023828 -
Trme43613g00001 128 Gene3D Peptidase S8/S53 domain 34 128 IPR036852 GO:0004252|GO:0006508
Trme43613g00001 128 SUPERFAMILY Subtilisin-like 38 128 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43613g00001 Trme-Chr43613 225 764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43613g00001 12 128 Subtilisin-like Serine Gene Family AT4G00230 71.795 8.88e-57 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43613g00001 - - gmx:100795950 191.815