Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4359g00001 ATGTTGATATTACAAGAGAGTTGCACAGACACAACAGGTTCATTTGTGATCTATGCACCTGTAGACATAGTTGCAATGAATGTGGTACTAAATGGAGGTGATCCAGATTATGTAGCACTTCTTCCATCTGGATTTGCTATACTTCCAGATGGAGGTGTTGGTGGTGAAAATGGAAATGGTGGATCTTTATTAACAGTTGCATTTCAAATATTGGTTGATTCTGTTCCTACTGCAAAACTTTCTCTTGGATCTGTTGCTACAGTTAATAATCTTATTGCTTGTACTGTTGAGAGGATTAAGGCTTCTTTGTCAGGTGAAGTTGCTTGA 327 0.3792 MLILQESCTDTTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGGVGGENGNGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSGEVA 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4359g00001 108 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 103 IPR042160 -
Trme4359g00001 108 SUPERFAMILY Bet v1-like 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme4359g00001 Trme-Chr4359 1709 2035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4359g00001 1 108 Homeobox Transcription Factor Family AT1G05230 87.273 8.67e-59 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4359g00001 K09338 - lja:Lj0g3v0159809.1 189.119