Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme434787g00001 GGAAACTTGTCGAATTTACCGTTTGATTCGGAAGAAGAGGATGAAGAAATCGACGACGAAGTGAGAAACGGTGGAGAAGAAGAGGATCTGATTCCGGTTGCGATGCCGGTAACCGATTACGACATCGTGATTGATGCGTTACCGTCGGCGACGATTAACGACCTTCACGAGATCGCGAAGCGAATGGTTGCTGGTGGATTTGGTAAAGAGTGTTCTCACGTGTACAGCAGTGGTAGAAGAGAGTTCTTGGAGGAAAGTCTCTCGAGATTAGGGTTACAGAAGCTTAGCATCGAAG 295 0.478 GNLSNLPFDSEEEDEEIDDEVRNGGEEEDLIPVAMPVTDYDIVIDALPSATINDLHEIAKRMVAGGFGKECSHVYSSGRREFLEESLSRLGLQKLSIE 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme434787g00001 98 MobiDBLite consensus disorder prediction 8 25 - -
Trme434787g00001 98 PANTHER EXOCYST COMPLEX PROTEIN EXO70 21 98 IPR004140 GO:0000145|GO:0006887
Trme434787g00001 98 SUPERFAMILY Cullin repeat-like 36 97 IPR016159 -
Trme434787g00001 98 Gene3D Exocyst complex component Exo70 10 98 - -
Trme434787g00001 98 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme434787g00001 Trme-Chr434787 3 297 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme434787g00001 31 98 EXO70 exocyst subunit family AT5G58430 83.824 1.18e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme434787g00001 K07195 - lja:Lj2g3v2364700.1 149.828