Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43463g00001 ATGGATGTTGTTGGAATCAGCACTGATGAACAGGAGGCTATATTTCGAACAGTAGCTGCTGTACTTCATTTAGGAAATATTGAATTTGTTAAAGCAATGGATGAAGGGACAGATTCCTCTAAACCGAAGGACGATAAATCTTATTTCCATTTGAAAACTGCAGCTGAACTTTTGAT 176 0.3693 MDVVGISTDEQEAIFRTVAAVLHLGNIEFVKAMDEGTDSSKPKDDKSYFHLKTAAELL 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43463g00001 58 ProSiteProfiles Myosin motor domain profile. 1 58 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme43463g00001 58 Pfam Myosin head (motor domain) 1 46 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme43463g00001 58 PANTHER MYOSIN 1 58 - -
Trme43463g00001 58 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 58 IPR027417 -
Trme43463g00001 58 Gene3D Myosin VI head, motor domain, U50 subdomain 5 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43463g00001 Trme-Chr43463 188 451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43463g00001 1 58 Myosins gene family AT5G43900 75.862 1.45e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43463g00001 K10357 - gmx:100791031 92.8189