Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43443g00001 ATGCGGTACACCCTTTTGCATCCGAGAGCTTTCTTCCCAAACAGTAGACGTTGCATACTCCACGCATCATTTCTTTCAAGACTTGCATTGCTTCTCTCCAGCGAGAATCTTTCACTGCCTCATGAAAATATATTGGTTCTTTTTCTGCAATATAAAAATCAGAATGTTGCTGTTAAGATTATCAACAAGGGAGAAACCCCTGAAGAGATTTCAAGAAGGGAGGGTCGGTTTGGCAGAGAGGTTGCTATGTTGTCGAAAGTTCAACACAAAACTTTAGTCAAGGTGGAATTTTGCATAAATATCTCTCGAGTATGCGACCAACGTGCTTGGATATGCGTGTGGCTGTTGGATTTGCYCTTGATATTGCCCGAGCAATGGAATGCTTACACTCACACAGGATCATTCACCGTGACCTTAATCCTG 423 0.4255 MRYTLLHPRAFFPNSRRCILHASFLSRLALLLSSENLSLPHENILVLFLQYKNQNVAVKIINKGETPEEISRREGRFGREVAMLSKVQHKTLVKVEFCINISRVCDQRAWICVWLLDLXLILPEQWNAYTHTGSFTVTLIL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43443g00001 141 SUPERFAMILY Protein kinase-like (PK-like) 50 103 IPR011009 -
Trme43443g00001 141 Gene3D Phosphorylase Kinase; domain 1 37 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43443g00001 Trme-Chr43443 239 984 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43443g00001 50 94 MAP Kinase Kinase Kinase AT3G27560 68.889 1.48e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43443g00001 - - psat:127126818 83.9593