Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43411g00001 ATGTATTATATTTGCAGAGGCTTCAATGATGCTGTAAATGGATTCAATGACGATGGTTGGTCTATACTGAACTGTGATGGCGCTGAGGATGTAATTATTGCTGTTAATTCAACCAAGAATTTGAGTAGCACTTCTAATCCAGCAAGTTCCCTTACATTCCTTGGAGGAATTCTATGTGCAAAAGCTTCTATGTTGCTCCAAAACGTTCCTCCTGCAGTTTTGGTTCGCTTTTTAAGGGAGCACCGCTCGGAATGGGCTGATTTCAATGTCGATGCTTATTGTGCCGCATCATTGAAAGCTGGAAACTATGCCTATCCAGGGATGAGGCCGACAAGATTCACAGGCAATCAAATAATCATGCCTCTTGGCCATACTATTGAACATGAAGAGATGCTTGAAGTTATTAGGCTTGAAGGCCACTCTCTTGCTCAAGAAGATGCTTTTGTTTCTAGGGACATTCATCTCTTACAG 471 0.4183 MYYICRGFNDAVNGFNDDGWSILNCDGAEDVIIAVNSTKNLSSTSNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYCAASLKAGNYAYPGMRPTRFTGNQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFVSRDIHLLQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43411g00001 157 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 4 157 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43411g00001 Trme-Chr43411 155 843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43411g00001 4 157 Homeobox Transcription Factor Family AT5G60690 82.468 1.66e-90 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43411g00001 K09338 - gmx:100804870 299.671