Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43326g00001 GAACGGATTCCAATAGAAGAAGTGTTTGAGCAGCTAAAATGTTCAAGACAAGGTCTCACCTCAGAAGAAGGAGCCAACAGGCTTCAAGTCTTTGGTCCAAACAAATTGGAAGAGAAAAAAGAGAGCAAGTTTTTGAAGTTTTTGGGTTTTATGTGGAATCCTTTATCATGGGTTATGGAAGCTGCGGCTATTATGGCCATTGCTTTGGCTAATGGAAGTGGAAGGCCTCCAGATTGGCAAGATTTCGTCGGAATCATCGCTCTCTTAGTCATCAACTCCACTATCAGTTTCATCGAAGAAAATAACGCTGGCAATGCCGCCGCTGCTCTCATGGCTGGTTTAGCCCCCAAAACCAAGGTAGTTAATAGTTAG 372 0.4355 ERIPIEEVFEQLKCSRQGLTSEEGANRLQVFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGSGRPPDWQDFVGIIALLVINSTISFIEENNAGNAAAALMAGLAPKTKVVNS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43326g00001 123 Gene3D - 50 123 - -
Trme43326g00001 123 PANTHER CALCIUM-TRANSPORTING ATPASE 5 121 - -
Trme43326g00001 123 SMART Cation_ATPase_N_a_2 1 71 IPR004014 -
Trme43326g00001 123 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 116 IPR023298 -
Trme43326g00001 123 Pfam Cation transporter/ATPase, N-terminus 3 65 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43326g00001 Trme-Chr43326 428 908 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43326g00001 1 123 Primary Pumps ATPases AT2G07560 83.740 3.36e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43326g00001 K01535 - gmx:100791692 206.838